Unit 5: Transporters in the Biological system - Practice Quiz

BTY269 — Biophysics 60 Questions
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1 Which type of membrane transport moves ions down their electrochemical gradient without using ATP?

Channels and Transporters in Biological system Easy
A. Primary active transport
B. Endocytosis
C. Secondary active transport
D. Passive transport through channels

2 A key structural difference between channels and transporters is that channels typically:

Channels and Transporters in Biological system Easy
A. Bind ATP for every transport cycle
B. Move only one solute per hour
C. Form a continuous pore across the membrane
D. Require covalent modification to open

3 Compared with transporters, ion channels generally allow ion movement that is:

Channels and Transporters in Biological system Easy
A. Independent of pore size
B. Much slower
C. Always against the gradient
D. Much faster

4 The -ATPase is best classified as a:

Channels and Transporters in Biological system Easy
A. Primary active transporter (pump)
B. Voltage-gated channel
C. Passive ion channel
D. Symporter driven by gradients

5 A transporter that moves two different solutes in opposite directions is called a(n):

Channels and Transporters in Biological system Easy
A. Channel
B. Antiporter
C. Symporter
D. Uniporter

6 Which property allows ion channels to conduct only specific ions?

Channels and Transporters in Biological system Easy
A. Cytoskeletal anchoring
B. ATP binding affinity
C. Selectivity of the pore
D. Membrane thickness

7 Voltage-gated ion channels open primarily in response to changes in:

Functional Properties of Voltage-Gated Ion Channels Easy
A. Extracellular pH
B. Membrane potential
C. ATP concentration
D. Ambient temperature

8 Which region of a voltage-gated channel acts as the voltage sensor?

Functional Properties of Voltage-Gated Ion Channels Easy
A. The extracellular loop only
B. The ATP-binding domain
C. The S4 transmembrane segment
D. The lipid bilayer core

9 The rapid rising phase of a neuronal action potential is caused mainly by the opening of:

Functional Properties of Voltage-Gated Ion Channels Easy
A. Voltage-gated channels
B. Voltage-gated channels
C. -ATPase pumps
D. leak channels

10 The state in which a voltage-gated channel cannot reopen immediately even if depolarized is called:

Functional Properties of Voltage-Gated Ion Channels Easy
A. Leak state
B. Resting closed state
C. Fully open state
D. Inactivated state

11 Which ion channel is chiefly responsible for repolarizing the neuronal membrane after an action potential?

Functional Properties of Voltage-Gated Ion Channels Easy
A. Voltage-gated channel
B. Voltage-gated channel
C. Voltage-gated channel
D. Ligand-gated channel

12 The term 'gating' in ion channels refers to:

Functional Properties of Voltage-Gated Ion Channels Easy
A. Pumping ions using ATP
B. Synthesis of channel proteins
C. Opening and closing of the channel
D. Diffusion of lipids in the membrane

13 Channelrhodopsins are light-sensitive proteins that function as:

Ion pumping and Ion Channel rhodopsins and their use Easy
A. ATP-driven ion pumps
B. DNA-binding proteins
C. Voltage sensors only
D. Light-gated ion channels

14 The chromophore that absorbs light in rhodopsins is:

Ion pumping and Ion Channel rhodopsins and their use Easy
A. Flavin
B. Heme
C. Chlorophyll
D. Retinal

15 The technique that uses light to control the activity of neurons expressing rhodopsins is called:

Ion pumping and Ion Channel rhodopsins and their use Easy
A. Optogenetics
B. Radiography
C. Chromatography
D. Electrophoresis

16 Bacteriorhodopsin functions in the cell as a light-driven:

Ion pumping and Ion Channel rhodopsins and their use Easy
A. Sodium channel
B. Proton pump
C. Glucose transporter
D. Calcium sensor

17 When channelrhodopsin-2 (ChR2) is illuminated with blue light, the expressing neuron typically undergoes:

Ion pumping and Ion Channel rhodopsins and their use Easy
A. Cell division
B. Depolarization
C. Hyperpolarization
D. No change in potential

18 The characteristic internal arrangement of microtubules in a eukaryotic cilium is described as:

Cilia and Flagella: Structure and Movement Easy
A. 9 + 0 arrangement
B. 9 + 2 arrangement
C. 7 + 2 arrangement
D. 2 + 9 arrangement

19 The motor protein that generates movement in cilia and flagella is:

Cilia and Flagella: Structure and Movement Easy
A. Myosin
B. Dynein
C. Actin
D. Kinesin

20 The bending movement of cilia and flagella results from:

Cilia and Flagella: Structure and Movement Easy
A. Rotation of the whole cell
B. Osmotic swelling of the axoneme
C. Sliding of microtubule doublets
D. Contraction of actin filaments

21 A researcher observes that a membrane transport process shows saturation kinetics (a maximum rate that cannot be exceeded even at very high substrate concentrations) and can be competitively inhibited. Which transport mechanism does this most likely represent?

Channels and Transporters in Biological system Medium
A. Carrier-mediated transport (transporter)
B. Bulk-phase endocytosis
C. Simple diffusion through the lipid bilayer
D. Flow through an open ion channel

22 Ion channels typically conduct – ions per second, while transporters move roughly – ions per second. What is the primary structural reason for this large difference in throughput?

Channels and Transporters in Biological system Medium
A. Transporters have larger pore diameters than channels
B. Channels transport only against the electrochemical gradient
C. Channels are always powered by ATP hydrolysis
D. Channels form a continuous open pore, whereas transporters undergo conformational cycling for each transport event

23 The -glucose cotransporter (SGLT) in the intestinal epithelium moves glucose into the cell even against its concentration gradient. What powers this uphill glucose movement?

Channels and Transporters in Biological system Medium
A. Direct hydrolysis of ATP by the transporter
B. The membrane potential acting on glucose charge
C. The inward electrochemical gradient of
D. The outward gradient of

24 Which statement best distinguishes primary from secondary active transport?

Channels and Transporters in Biological system Medium
A. Primary active transport occurs only in mitochondria, secondary only in the plasma membrane
B. Primary active transport is passive, while secondary requires channels
C. Primary active transport uses a chemical energy source directly (e.g., ATP), while secondary uses an ion gradient established by another pump
D. Primary active transport moves ions down their gradient, while secondary moves them up

25 During an action potential, voltage-gated channels inactivate rapidly, but voltage-gated channels do not inactivate as quickly. What is the functional consequence of this timing difference?

Functional Properties of Voltage-Gated Ion Channels Medium
A. It causes the resting potential to become more positive permanently
B. It prevents the membrane from ever depolarizing
C. It allows to replace as the depolarizing ion
D. It ensures repolarization follows depolarization and helps set the refractory period

26 The voltage sensor of a voltage-gated ion channel is located primarily in which region?

Functional Properties of Voltage-Gated Ion Channels Medium
A. The extracellular selectivity filter
B. The intracellular C-terminal tail
C. The S4 transmembrane segment, which carries positively charged residues
D. The lipid-facing S1 segment carrying negative charges

27 The channel selectivity filter conducts far better than the smaller . What explains this counterintuitive selectivity?

Functional Properties of Voltage-Gated Ion Channels Medium
A. Carbonyl oxygens in the filter mimic 's hydration shell, but are too far apart to compensate 's dehydration energy
B. carries a higher charge than
C. is too large to physically fit through the pore
D. The filter is lined with positive charges that repel more strongly

28 In a voltage-clamp experiment, a neuron is depolarized and held at a constant positive voltage. The inward current rises then decays to near zero within a few milliseconds despite the maintained depolarization. This decay is due to:

Functional Properties of Voltage-Gated Ion Channels Medium
A. Depletion of extracellular
B. Closure of the activation gate
C. Fast inactivation of channels
D. Opening of voltage-gated channels

29 Using the Nernst equation, at with and , the equilibrium potential for is approximately:

Functional Properties of Voltage-Gated Ion Channels Medium
A.
B.
C.
D.

30 A toxin binds the extracellular mouth of voltage-gated channels and physically blocks the pore (like tetrodotoxin). What is the expected effect on an axon's action potential?

Functional Properties of Voltage-Gated Ion Channels Medium
A. Repolarization is prevented, causing sustained depolarization
B. Action potentials become larger and longer
C. Action potentials are abolished because the depolarizing influx is blocked
D. The resting potential shifts strongly positive

31 Bacteriorhodopsin and channelrhodopsin both use retinal and absorb light, yet they function differently. What is the key functional distinction?

Ion pumping and Ion Channel rhodopsins and their use Medium
A. Bacteriorhodopsin uses ATP, whereas channelrhodopsin uses light
B. Bacteriorhodopsin is a light-driven ion pump, whereas channelrhodopsin is a light-gated ion channel
C. Both are pumps but move ions in opposite directions only
D. Bacteriorhodopsin conducts ions passively, whereas channelrhodopsin actively pumps them

32 In optogenetics, expressing channelrhodopsin-2 (ChR2) in a neuron and illuminating it with blue light typically causes:

Ion pumping and Ion Channel rhodopsins and their use Medium
A. Depolarization and firing due to cation (mainly ) influx
B. ATP-driven ejection of
C. Permanent inactivation of voltage-gated channels
D. Hyperpolarization and silencing due to influx

33 To silence neurons optogenetically, researchers often use halorhodopsin. What does halorhodopsin do upon light activation?

Ion pumping and Ion Channel rhodopsins and their use Medium
A. Opens a channel that triggers firing
B. Hydrolyzes ATP to export
C. Pumps into the cell, hyperpolarizing the membrane
D. Pumps out of the cell, depolarizing it

34 The -ATPase moves 3 out and 2 in per ATP hydrolyzed. Why is this pump described as electrogenic?

Ion pumping and Ion Channel rhodopsins and their use Medium
A. It produces a net movement of one positive charge out per cycle, contributing to membrane potential
B. It depends on light rather than ATP
C. It transports only uncharged molecules
D. It moves equal charges in both directions, generating no net current

35 In the photocycle of bacteriorhodopsin, absorption of a photon causes retinal to isomerize. This isomerization is best described as:

Ion pumping and Ion Channel rhodopsins and their use Medium
A. 13-cis to 9-cis, releasing ATP
B. all-trans to 13-cis, which triggers proton transfer steps
C. all-trans to 11-cis, which closes an ion channel
D. 11-cis to all-trans, as in vertebrate vision

36 The classic axoneme of eukaryotic cilia and flagella has which arrangement of microtubules?

Cilia and Flagella: Structure and Movement Medium
A. 2 outer doublets surrounding 9 central singlets
B. 9 outer triplets with no central pair
C. 13 protofilaments arranged in a single tube
D. 9 outer doublets surrounding 2 central singlets (the "9+2" pattern)

37 Ciliary bending is generated when dynein arms on one doublet walk along the adjacent doublet. Why does this sliding produce bending rather than telescoping apart?

Cilia and Flagella: Structure and Movement Medium
A. The microtubules are fused end to end and cannot slide
B. Nexin links and basal anchoring resist sliding, converting it into localized bending
C. Dynein pushes the doublets outward radially
D. The central pair physically clamps the doublets in place

38 Which motor protein powers the movement of the eukaryotic axoneme, and what is its energy source?

Cilia and Flagella: Structure and Movement Medium
A. The bacterial flagellar motor, powered by a proton gradient
B. Axonemal dynein, powered by ATP hydrolysis
C. Kinesin, powered by GTP hydrolysis
D. Myosin, powered by ATP hydrolysis

39 A key difference between bacterial and eukaryotic flagella is the mechanism of movement. The bacterial flagellum moves by:

Cilia and Flagella: Structure and Movement Medium
A. Contracting actin-myosin filaments
B. Bending via ATP-driven dynein sliding
C. Whip-like beating using a 9+2 axoneme
D. Rotating like a propeller, driven by a proton-motive-force-powered motor

40 In primary ciliary dyskinesia, defective dynein arms impair ciliary beating. Besides respiratory problems, patients may show situs inversus (reversed organ placement). This link suggests that:

Cilia and Flagella: Structure and Movement Medium
A. Dynein directly transcribes developmental genes
B. Situs inversus is caused by defective 9+0 sensory cilia only
C. Cilia synthesize the proteins that determine organ shape
D. Motile cilia establish left-right body asymmetry during development

41 In a Hodgkin-Huxley analysis, the conductance is described as . If a mutation removes the inactivation gate while leaving activation intact, which functional consequence is most directly expected?

Functional Properties of Voltage-Gated Ion Channels Hard
A. Conversion of the channel into a -selective pore
B. A hyperpolarizing shift in the activation threshold
C. Complete loss of the action potential upstroke
D. Sustained current during a prolonged depolarization instead of a transient spike

42 The gating charge movement of a voltage sensor produces a measurable gating current that precedes ionic current. Which observation best distinguishes a genuine gating current from a leak or capacitive artifact?

Functional Properties of Voltage-Gated Ion Channels Hard
A. It persists unchanged when all permeant ions are removed and pore is blocked but grows without bound
B. It reverses sign exactly at the equilibrium potential
C. It scales linearly with voltage at all potentials without saturation
D. It is nonlinear, saturates at extreme voltages, and its time integral (charge) is conserved

43 The selectivity filter of voltage-gated channels contains the signature sequence TVGYG. Why can this filter conduct near the diffusion limit yet strongly exclude ?

Functional Properties of Voltage-Gated Ion Channels Hard
A. The filter is negatively charged and electrostatically repels the smaller ion
B. The filter binds so tightly that it becomes permanently trapped
C. is larger than and cannot physically enter the pore
D. Backbone carbonyl oxygens mimic 's hydration shell geometry, but are too far apart to efficiently coordinate the smaller

44 A voltage-gated channel shows a Boltzmann activation curve with a slope factor mV. Assuming at ( mV), what is the effective gating valence ?

Functional Properties of Voltage-Gated Ion Channels Hard
A.
B.
C.
D.

45 During the relative refractory period of a neuron, a larger-than-normal stimulus is required to fire an action potential primarily because:

Functional Properties of Voltage-Gated Ion Channels Hard
A. The membrane capacitance temporarily doubles
B. The -ATPase stops functioning
C. All channels are permanently destroyed
D. Some channels remain inactivated while voltage-gated channels are still open

46 Consider a cell with intracellular mM, extracellular mM, and mV at ( mV). What is the approximate electrochemical driving force on ()?

Channels and Transporters in Biological system Hard
A. mV (near equilibrium)
B. mV (strong outward drive)
C. mV (moderate outward drive)
D. mV (strong inward drive)

47 Which criterion most fundamentally distinguishes a channel from a transporter (carrier) at the mechanistic level?

Channels and Transporters in Biological system Hard
A. A channel is always faster because it binds substrate more tightly than a transporter
B. A channel provides a continuous open pore, while a transporter undergoes alternating-access conformational cycling exposing the binding site to one side at a time
C. A channel moves only anions while a transporter moves only cations
D. A channel always consumes ATP while a transporter never does

48 The cotransporter (SGLT) accumulates glucose against its gradient. This is thermodynamically possible because:

Channels and Transporters in Biological system Hard
A. The transporter creates glucose from metabolically
B. SGLT directly hydrolyzes ATP for each glucose molecule
C. The favorable inward electrochemical gradient is coupled to uphill glucose transport (secondary active transport)
D. Glucose diffuses passively down its own gradient

49 For the -ATPase moving 3 out and 2 in per ATP, why is this pump described as electrogenic and what is its direct membrane effect?

Channels and Transporters in Biological system Hard
A. It moves only neutral molecules, affecting only osmolarity
B. It imports one net positive charge, depolarizing the membrane
C. It exports one net positive charge per cycle, contributing a small hyperpolarizing current
D. It moves equal charges, so it has no net electrical effect

50 In the alternating-access model, a uniporter (e.g., GLUT1) reaches a maximal transport rate at saturating substrate. The rate-limiting step at saturation is typically:

Channels and Transporters in Biological system Hard
A. The conformational reorientation of the empty or loaded carrier between outward- and inward-facing states
B. ATP hydrolysis by the uniporter
C. The rate of substrate binding to the outward-facing site
D. Diffusion of substrate in the bulk solution

51 Bacteriorhodopsin and channelrhodopsin both contain retinal and absorb light, yet they are functionally distinct. The key difference is:

Ion pumping and Ion Channel rhodopsins and their use Hard
A. Bacteriorhodopsin is a light-driven pump (active transport), whereas channelrhodopsin is a light-gated passive ion channel
B. Bacteriorhodopsin is a passive channel while channelrhodopsin pumps
C. Both are purely structural proteins with no transport function
D. Both are ATP-dependent pumps but respond to different wavelengths

52 In optogenetics, a neuroscientist wants to silence (hyperpolarize) neurons with light. Which tool and mechanism is appropriate?

Ion pumping and Ion Channel rhodopsins and their use Hard
A. Halorhodopsin, a light-driven inward pump that hyperpolarizes the membrane
B. Channelrhodopsin-2, a cation channel that depolarizes neurons
C. Bacteriorhodopsin expressed to import
D. A voltage-gated channel activated by light

53 The photocycle of bacteriorhodopsin involves all-trans to 13-cis retinal isomerization. What is the direct functional role of this isomerization?

Ion pumping and Ion Channel rhodopsins and their use Hard
A. It permanently opens a channel that never closes
B. It directly synthesizes ATP within the retinal binding pocket
C. It triggers conformational changes that alter the pKa of proton-donor/acceptor residues, driving vectorial proton release and uptake
D. It converts light into heat without any ion movement

54 Compared with wild-type channelrhodopsin-2, engineered 'step-function opsins' (e.g., with a C128 mutation) show greatly prolonged open times. The primary optogenetic advantage is:

Ion pumping and Ion Channel rhodopsins and their use Hard
A. Bistable control—a brief light pulse opens the channel and a second wavelength closes it, enabling sustained depolarization with minimal light
B. Conversion of the channel into an ATP-driven pump
C. Faster millisecond kinetics ideal for high-frequency spiking
D. Complete loss of ion selectivity to conduct all molecules

55 A light-driven proton pump moves against a of 2 units plus a membrane potential of 120 mV (inside negative, opposing outward pumping is not relevant here; consider work to move out). Roughly how much energy per proton must the photon supply to overcome the electrochemical gradient at ? (Use mV per pH unit.)

Ion pumping and Ion Channel rhodopsins and their use Hard
A. meV per proton
B. meV per proton
C. meV per proton
D. meV per proton

56 The '9+2' axoneme generates bending through dynein activity. Sliding of adjacent outer doublets is converted into bending rather than telescoping because:

Cilia and Flagella: Structure and Movement Hard
A. The plasma membrane physically clamps the tip to prevent extension
B. Dynein arms actively pull the microtubules into curves
C. The central pair rotates and mechanically bends the doublets
D. Nexin links and radial spokes resist and constrain sliding, forcing localized bending

57 For coordinated bending, dynein arms on opposite sides of the axoneme cannot be simultaneously active. What ensures this asymmetric, switched activity?

Cilia and Flagella: Structure and Movement Hard
A. The nexin links generate the ATP needed for one side
B. Random thermal fluctuations alone determine which side is active
C. ATP is available only on one side of the axoneme at a time
D. Regulatory signaling via the central pair, radial spokes, and dynein regulatory complex switches dynein activity between doublet sets

58 A eukaryotic flagellum and a bacterial flagellum both produce motility but are fundamentally different. Which statement correctly contrasts them?

Cilia and Flagella: Structure and Movement Hard
A. The bacterial flagellum bends via dynein while the eukaryotic one rotates
B. Both use dynein motors and ATP to bend
C. Both are passive structures moved by fluid currents
D. The eukaryotic flagellum bends using ATP-powered dynein on microtubules, while the bacterial flagellum is a rigid helix rotated by a proton-motive-force-driven motor

59 Intraflagellar transport (IFT) is essential for building and maintaining cilia. Loss of anterograde IFT (kinesin-2 dependent) would most directly cause:

Cilia and Flagella: Structure and Movement Hard
A. Excessive elongation of cilia beyond normal length
B. Failure to deliver axonemal precursors to the tip, resulting in short or absent cilia
C. Conversion of the cilium into a bacterial-type flagellum
D. Immediate reversal of ciliary beat direction

60 Primary cilia (9+0, immotile) differ functionally from motile cilia (9+2). What is the principal role of primary cilia and the structural reason for their immotility?

Cilia and Flagella: Structure and Movement Hard
A. They pump fluid rapidly using extra dynein arms and a triple central pair
B. They rotate like bacterial flagella using a proton motor
C. They serve as sensory/signaling antennae; they lack the central pair and dynein arms needed for beating
D. They are simply defective motile cilia with no biological function